python - Sci-kit-learn Normalization removes column headers -
i have pandas data frame 22 columns, index datetime.
i trying normalize data using following code:
from sklearn.preprocessing import minmaxscaler # normalization scaler = minmaxscaler(copy = false) normal_data = scaler.fit_transform(all_data2) the problem lose lot of data applying function, example, here before:
all_data2.head(n = 5) out[105]: btc_price btc_change btc_change_label eth_price \ time 2017-09-02 21:54:00 4537.8338 -0.066307 0 330.727 2017-09-02 22:29:00 4577.6050 -0.056294 0 337.804 2017-09-02 23:04:00 4566.3600 -0.059716 0 336.938 2017-09-02 23:39:00 4590.0313 -0.056242 0 342.929 2017-09-03 00:14:00 4676.1925 -0.035857 0 354.171 block_size difficulty estimated_btc_sent \ time 2017-09-02 21:54:00 142521291.0 8.880000e+11 2.040000e+13 2017-09-02 22:29:00 136524566.0 8.880000e+11 2.030000e+13 2017-09-02 23:04:00 134845546.0 8.880000e+11 2.010000e+13 2017-09-02 23:39:00 133910638.0 8.880000e+11 1.990000e+13 2017-09-03 00:14:00 130678099.0 8.880000e+11 2.010000e+13 estimated_transaction_volume_usd hash_rate \ time 2017-09-02 21:54:00 923315359.5 7.417412e+09 2017-09-02 22:29:00 918188066.9 7.152505e+09 2017-09-02 23:04:00 910440915.6 7.240807e+09 2017-09-02 23:39:00 901565929.9 7.284958e+09 2017-09-03 00:14:00 922422228.4 7.152505e+09 miners_revenue_btc ... n_blocks_mined \ time ... 2017-09-02 21:54:00 2395.0 ... 168.0 2017-09-02 22:29:00 2317.0 ... 162.0 2017-09-02 23:04:00 2342.0 ... 164.0 2017-09-02 23:39:00 2352.0 ... 165.0 2017-09-03 00:14:00 2316.0 ... 162.0 n_blocks_total n_btc_mined n_tx nextretarget \ time 2017-09-02 21:54:00 483207.0 2.100000e+11 241558.0 483839.0 2017-09-02 22:29:00 483208.0 2.030000e+11 236661.0 483839.0 2017-09-02 23:04:00 483216.0 2.050000e+11 238682.0 483839.0 2017-09-02 23:39:00 483220.0 2.060000e+11 237159.0 483839.0 2017-09-03 00:14:00 483223.0 2.030000e+11 237464.0 483839.0 total_btc_sent total_fees_btc totalbtc \ time 2017-09-02 21:54:00 1.620000e+14 2.959788e+10 1.650000e+15 2017-09-02 22:29:00 1.600000e+14 2.920230e+10 1.650000e+15 2017-09-02 23:04:00 1.600000e+14 2.923498e+10 1.650000e+15 2017-09-02 23:39:00 1.580000e+14 2.899158e+10 1.650000e+15 2017-09-03 00:14:00 1.580000e+14 2.917904e+10 1.650000e+15 trade_volume_btc trade_volume_usd time 2017-09-02 21:54:00 102451.92 463497284.7 2017-09-02 22:29:00 102451.92 463497284.7 2017-09-02 23:04:00 102451.92 463497284.7 2017-09-02 23:39:00 102451.92 463497284.7 2017-09-03 00:14:00 96216.78 440710136.1 [5 rows x 22 columns] afterwards, numpy array new index has been normalized (which not date column) , of column headers removed.
can somehow normalize select columns of original data frame while keeping them in-place?
if not, how can select desired columns froms normalized numpy array , insert them original df?
try sklearn.preprocessing.scale. no need class-based scaler here.
standardize dataset along axis. center mean , component wise scale unit variance.
you can use so:
from sklearn.preprocessing import scale df = pd.dataframe({'col1' : np.random.randn(10), 'col2' : np.arange(10, 30, 2), 'col3' : np.arange(10)}, index=pd.date_range('2017', periods=10)) # specify columns scale n~(0,1) to_scale = ['col2', 'col3'] df.loc[:, to_scale] = scale(df[to_scale]) print(df) col1 col2 col3 2017-01-01 -0.28292 -1.56670 -1.56670 2017-01-02 -1.55172 -1.21854 -1.21854 2017-01-03 0.51800 -0.87039 -0.87039 2017-01-04 -1.75596 -0.52223 -0.52223 2017-01-05 1.34857 -0.17408 -0.17408 2017-01-06 0.12600 0.17408 0.17408 2017-01-07 0.21887 0.52223 0.52223 2017-01-08 0.84924 0.87039 0.87039 2017-01-09 0.32555 1.21854 1.21854 2017-01-10 0.54095 1.56670 1.56670 to return modified copy:
new_df = df.copy() new_df.loc[:, to_scale] = scale(df[to_scale]) as warning: hard without seeing data, have large values (7.417412e+09). warning here, , venture it's safe ignore--it's being thrown because there's tolerance test, testing whether new mean equal 0, that's failing. see if it's failing, use new_df.mean() , new_df.std() check columns have been normalized n~(0,1).
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